BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B06SP1|AL427264
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1356 1837 0.0
>3x_Contig1356
Length = 8043
Score = 1837 bits (926), Expect = 0.0
Identities = 952/957 (99%), Gaps = 4/957 (0%)
Strand = Plus / Plus
Query: 1 taaacagtattatgcctttaacaattaaaatataaaggcacttaaaccttaaacgtgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4686 taaacagtattatgcctttaacaattaaaatataaaggcacttaaaccttaaacgtgtat 4745
Query: 61 tgtaaacctctaatcaattgacaaaaatgttgaagattcgtcaaggtagagagaattacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4746 tgtaaacctctaatcaattgacaaaaatgttgaagattcgtcaaggtagagagaattacc 4805
Query: 121 gggcgccattggaaagcgttgaagctttccactgtgagagtactaactctcgcactgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4806 gggcgccattggaaagcgttgaagctttccactgtgagagtactaactctcgcactgatt 4865
Query: 181 ccatcgaattgcagattgggaaccagattcctcgattttccagtgctaaagaaaatcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4866 ccatcgaattgcagattgggaaccagattcctcgattttccagtgctaaagaaaatcagt 4925
Query: 241 ggaattggtcgcctagatgttttcctttttcggacgaaaaacttaaaagatatggatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4926 ggaattggtcgcctagatgttttcctttttcggacgaaaaacttaaaagatatggatggt 4985
Query: 301 aagaaaacaacaaagtgcggtgtacatatagtaataggatttaaacgcatttttatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4986 aagaaaacaacaaagtgcggtgtacatatagtaataggatttaaacgcatttttatatgt 5045
Query: 361 ggtgtattgtggtaacagtcccttattttcattttgagtctcaccacttactaatttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5046 ggtgtattgtggtaacagtcccttattttcattttgagtctcaccacttactaatttttt 5105
Query: 421 cgcaccgaacttacaatctgtaggcagactcgccaatttcctcctacgctccggttccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5106 cgcaccgaacttacaatctgtaggcagactcgccaatttcctcctacgctccggttccac 5165
Query: 481 tccctccctgttctccaccctgttgggtacacggag-gcaagcttactggcctgcctacc 539
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5166 tccctccctgttctccaccctgttgggtacacggagtgcaagcttactggcctgcctacc 5225
Query: 540 ggtagcaaagcttcctgcctaaccttaccgtctcccccgtccaacccatgcttccagctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5226 ggtagcaaagcttcctgcctaaccttaccgtctcccccgtccaacccatgcttccagctg 5285
Query: 600 ggaatagggcccatcttctcctccgctattgtctctgcgaacagcttggttccctagtat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5286 ggaatagggcccatcttctcctccgctattgtctctgcgaacagcttggttccctagtat 5345
Query: 660 gggtcctaccattgaatgatttttttggtgaacttttcagaatcattgcgaagtttgagg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5346 gggtcctaccattgaatgatttttttggtgaacttttcagaatcattgcgaagtttgagg 5405
Query: 720 atatcgacctttttcaccaatacgaacaatctcagtttgaatttaatgctttttttgata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5406 atatcgacctttttcaccaatacgaacaatctcagtttgaatttaatgctttttttgata 5465
Query: 780 gttacagcttttgttgatttcacatagagattttagttgatattgcaattcatttcacgt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5466 gttacagcttttgttgatttcacatagagattttagttgatattgcaattcatttcacgt 5525
Query: 840 attctttttataatagaaggtttcaatagagcttggtttaattttccttttcctttttgt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5526 attctttttataatagaaggtttcaatagagcttggtttaattttccttttcctttttgt 5585
Query: 900 tgtttagctt-actcaccgaaccatacaataagaaagca--gcaacatgtctgaagc 953
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5586 tgtttagcttaactcaccgaaccatacaataagaaagcaagccaacatgtctgaagc 5642
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7836
Number of Sequences: 1807
Number of extensions: 7836
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)